ArrayExplorer {aroma.affymetrix}R Documentation

The ArrayExplorer class

Description

Package: aroma.affymetrix
Class ArrayExplorer

Object
~~|
~~+--Explorer
~~~~~~~|
~~~~~~~+--ArrayExplorer

Directly known subclasses:

public abstract static class ArrayExplorer
extends Explorer

Usage

ArrayExplorer(csTuple=NULL, ...)

Arguments

csTuple

An AffymetrixCelSet object.

...

Not used.

Fields and Methods

Methods:

addColorMap -
getColorMaps -
getDataSet -
getSetTuple -
nbrOfChipTypes -
process -
setArrays -
setColorMaps -

Methods inherited from Explorer:
addIncludes, addIndexFile, as.character, display, getAlias, getArraysOfInput, getAsteriskTags, getFullName, getIncludePath, getMainPath, getName, getNameOfInput, getNames, getPath, getReportPathPattern, getRootPath, getSampleLayerPrefix, getSubname, getTags, getTagsOfInput, getTemplatePath, getVersion, nbrOfArrays, process, setAlias, setArrays, setReportPathPattern, setSubname, setup, splitByReportPathPattern, updateSetupExplorerFile

Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis

Author(s)

Henrik Bengtsson


[Package aroma.affymetrix version 3.2.0 Index]