read_pli {aphylo}

Read PLI files from SIFTER

Description

Read PLI files from SIFTER

Usage

read_pli(fn, dropNAs = TRUE)

Arguments

fn

Full path to the file

dropNAs

Logical scalar. When TRUE, the function will discard any protein that has no annotations.

Value

A data table object including the following columns:

• name: Used to match UniProtKB data and GOA,

• number,

• go: A list of the GO annotations

• moc: Evidence code

• fam: Name of the family

See Also

Other reading: panther-tree, read_nhx()