data.nex {ape}R Documentation

NEXUS Data Example


Example of Protein data in NEXUS format (Maddison et al., 1997). Data is written in interleaved format using a single DATA block. Original data from Rokas et al (2002).




ASCII text in NEXUS format


Maddison, D. R., Swofford, D. L. and Maddison, W. P. (1997) NEXUS: an extensible file format for systematic information. Systematic Biology, 46, 590–621.

Rokas, A., Nylander, J. A. A., Ronquist, F. and Stone, G. N. (2002) A maximum likelihood analysis of eight phylogenetic markers in Gallwasps (Hymenoptera: Cynipidae): implications for insect phylogenetic studies. Molecular Phylogenetics and Evolution, 22, 206–219.

[Package ape version 5.5 Index]