simulate.Yi {apTreeshape}R Documentation

Simulates the random variables Y_i

Description

Simulates the random variables Y_i

Usage

simulate.Yi(N, epsilon, beta, n)

Arguments

N

Number of simulated Y_i

epsilon

Minimum size of unsampled splits (see appendix 1)

beta

Imbalance index

n

Number of marks in the interval

Details

(Y_i) are independant random variables with density 2/(λ_ε) exp(-(β+n+1)x) (1-exp(-x))^β

Author(s)

Odile Maliet, Fanny Gascuel & Amaury Lambert

References

Maliet O., Gascuel F., Lambert A. (2018) Ranked tree shapes, non-random extinctions and the loss of phylogenetic diversity, bioRxiv 224295, doi: https://doi.org/10.1101/224295


[Package apTreeshape version 1.5-0.1 Index]