apo {anapuce}

Apo AI data

Description

An exemple data set for unpaired data analysis. A dataframe with the normalized Apo data set as used in the original article.

Format

apo is a dataframe. The first column contains gene names. The 8 columns cond1.1 to cond1.8 contain normalized normal mice measurements and the 8 columns cond2.1 to cond2.8 correspond to normalized KO mice measurements

References

M.J. Callow, S. Dudoit, E.L. Gong, T.P. Speed, and E.M. Rubin. Microarray expression profiling identifies genes with altered expression in hdl-deficien mice. Genome Res., 10(12) : 2022-9, 2000

See Also

DiffAnalysis.unpaired

Examples

data(apo)
# resApo <- DiffAnalysis.unpaired(apo,n=1,ind.array=1:8,varmixt.meth=TRUE)
# Histogramm of the raw-pvalues
# hist(resApo$PValueVM)