R: Plot species responses along gradients or latent variables

plot.sppResponse {analogue}

R Documentation

Plot species responses along gradients or latent variables

Description

Observed abundances and fitted response curves along

Usage

## S3 method for class 'sppResponse'
plot(x,
     which = seq_along(x),
     display = c("observed", "fitted"),
     xlab = "Gradient", ylab = "Abundance",
     main = NULL,
     lcol = "red",
     lwd = 2,
     ...)

Arguments

`x`	an object of class `"sppResponse"`.
`which`	numeric or logical vector; which species (components of `x`) to plot.
`display`	character; plot the observed data or the fitted species response curve or both?
`xlab`, `ylab`, `main`	titles for the x and y axis label and the main title. If `main` is `NULL`, suitable main titles are taken from `x`.
`lwd`	numeric; width of the line used to draw the fitted species response function if drawn.
`lcol`	the colour to use to draw the fitted species response.
`...`	graphical arguments passed `plot` and `lines` used internally.

Details

Currently, no attempt is made to split the device into an appropriate number of panels. This is up to the user to decide. See the Examples section of sppResponse for one way to handle this.

Value

One or more plots, drawn on the current device.

Author(s)

Gavin L. Simpson