plot.residLen {analogue} | R Documentation |
Base graphics plot method for residLen
objects.
## S3 method for class 'residLen'
plot(x, probs = c(0.9, 0.95, 0.99), ncol = 1,
lcol = "red", llty = "dashed", xlab = NULL, ylab = NULL,
main = "Residual distances", rug = TRUE, ...)
x |
Object of class |
probs |
numeric; vector of probability quantiles to compute from the sets of residual distances. |
ncol |
numeric; number of columns for the plot layout. Choices
are |
lcol , llty |
colour and line-type for the quantiles. |
xlab , ylab |
Axis labels. If not supplied, suitable defaults are generated, depending on whether RDA or CCA was used as the underlying ordination model. |
main |
character; title for the plot. |
rug |
logical; should rug plots of the actual distances be drawn? |
... |
additional arguments passed to |
A plot on the current device.
Returns, invisibly, a list with two components (train
and
passive
), each and object of the type returned by
density
.
Gavin L. Simpson
residLen
, plot.residLen
,
histogram.residLen
, densityplot.residLen
.
## load the Imbrie and Kipp example data
data(ImbrieKipp, SumSST, V12.122)
## squared residual lengths for Core V12.122
rlens <- residLen(ImbrieKipp, SumSST, V12.122)
rlens
## plot a histogram of the residual distances
plot(rlens)