amExample5 {amregtest}

Example 5 Wildlife data set

Description

This is sample data copied from allelematch::amExampleData in version 5.2.1 of package allelematch. We use this data to test allelematch backwards compatibility.

Format

Data frame with samples in rows, and alleles in columns. Missing data is represented as "-99".

Details

In this final example we use real data from the non-invasive sampling of a wildlife population. The data have been anonymized by changing sampling details. A single column giving the gender is also available and we show how this can be used as an extra locus. Missing data is also more common at some loci than at others, with a total load of about 10%.

References

https://github.com/cran/allelematch