Automated Model Benchmarking R Package


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Documentation for package ‘amber’ version 1.0.3

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amber-package Overview of AMBER functions
correlationMatrix Correlation matrix for statistical metrics computed by AMBER
correlationMatrixDiff Plot a matrix that shows the difference between two correlation coefficient matrices computed by correlationMatrix.
correlationMatrixFluxnet Correlation matrix for statistical metrics computed by AMBER for FLUXNET data
globalSumsTable Table of globally summed values and corresponding biases.
metrics.compare Compares global mean statistical meterics for multiple model runs
plotBars Barplots of reference and model data with same unit
plotEnsembleHovmoeller Hovmoeller Diagram for model ensemble
plotEnsembleMean Ensemble mean plots of AMBER results (bias, bias scores, etc)
plotFluxnetStats Plots that show statistical metrics for FLUXNET sites
plotGrid Plots raster layers of a raster stack object
plotHovmoeller Plot Hovmoeller diagrams that show monthly climatological mean values and biases
plotNc Plots the time-mean of a variable stored in NetCDF model output on a regular grid
plotNcIrreg Plots the time-mean of a variable stored in NetCDF model output on an irregular grid
plotZonalMeans Plot zonal mean values of model and reference data in a single figure
plotZonalMeanStats Plot zonal mean plots of AMBER results (bias, bias scores, etc)
scores.compare Compares scores from two model runs
scores.compare.benchmarks Compares model scores against scores reference scores.
scores.compare.ensemble Summarize scores from multiple model runs in single figure.
scores.fluxnet.csv Scores for FLUXNET reference data in CSV format
scores.fluxnet.nc Scores for FLUXNET reference data in NetCDF format
scores.fluxnet.site Scores for FLUXNET reference data when model run at FLUXNET site
scores.functional.response Response of a variable to its forcing
scores.grid.notime Scores for gridded reference data that do not have a varying time dimension
scores.grid.time Scores for gridded reference data with a varying time dimension
scores.runoff Scores for runoff
scores.site.notime Scores for site-level reference data that do not vary in time
scores.tables Summarize results in a table and a plot
scores.tables.tweak Tweak summary table
seasonalCycle Zonal mean plots of model and reference data
seasonalCycleIrreg Zonal mean plots of model and reference data on an irregular grid
zonalMean Zonal mean plots of model and reference data
zonalMeanIrreg Zonal mean plots of model and reference data on an irregular grid
zonalMeanStats Zonal mean plots of AMBER results (bias, bias scores, etc)