albatross-package |
PARAFAC Analysis of Fluorescence Excitation-Emission Matrices |
absindex |
Functions of absorbance data |
absorp |
Synthetic fluorescence excitation-emission matrices and absorbance spectra |
albatross |
PARAFAC Analysis of Fluorescence Excitation-Emission Matrices |
as.data.frame.feem |
Transform a FEEM object into a data.frame |
as.data.frame.feemcube |
Transform a FEEM object into a data.frame |
as.list.feemcube |
Data cubes of fluorescence excitation-emission matrices |
coef.feemflame |
Fluorescence and scAttering Model Estimation |
coef.feemjackknife |
Jack-knife outlier detection in PARAFAC models |
coef.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
coef.feemsplithalf |
Split-half analysis of PARAFAC models |
cube |
Synthetic fluorescence excitation-emission matrices and absorbance spectra |
diverging.colours |
Perceptually uniform palettes |
feem |
Create a fluorescence excitation-emission matrix object |
feem.character |
Create a fluorescence excitation-emission matrix object |
feem.connection |
Create a fluorescence excitation-emission matrix object |
feem.data.frame |
Create a fluorescence excitation-emission matrix object |
feem.matrix |
Create a fluorescence excitation-emission matrix object |
feemcorcondia |
Core consistency diagnostic for PARAFAC models |
feemcube |
Data cubes of fluorescence excitation-emission matrices |
feemcube.array |
Data cubes of fluorescence excitation-emission matrices |
feemcube.feemflame |
Data cubes of fluorescence excitation-emission matrices |
feemcube.feemjackknife |
Data cubes of fluorescence excitation-emission matrices |
feemcube.feemparafac |
Data cubes of fluorescence excitation-emission matrices |
feemcube.feemsplithalf |
Data cubes of fluorescence excitation-emission matrices |
feemcube.list |
Data cubes of fluorescence excitation-emission matrices |
feemflame |
Fluorescence and scAttering Model Estimation |
feemgrid |
Interpolate FEEMs on a given wavelength grid |
feemgrid.feem |
Interpolate FEEMs on a given wavelength grid |
feemgrid.feemcube |
Interpolate FEEMs on a given wavelength grid |
feemgrid.list |
Interpolate FEEMs on a given wavelength grid |
feemife |
Absorbance-based inner filter effect correction |
feemife.feem |
Absorbance-based inner filter effect correction |
feemife.feemcube |
Absorbance-based inner filter effect correction |
feemife.list |
Absorbance-based inner filter effect correction |
feemindex |
Fluorescence indices and peak values |
feemindex.feem |
Fluorescence indices and peak values |
feemindex.feemcube |
Fluorescence indices and peak values |
feemindex.list |
Fluorescence indices and peak values |
feemjackknife |
Jack-knife outlier detection in PARAFAC models |
feemlist |
Create lists of FEEM objects |
feemlist.character |
Create lists of FEEM objects |
feemlist.EEM |
Create lists of FEEM objects |
feemlist.eemlist |
Create lists of FEEM objects |
feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
feems |
Synthetic fluorescence excitation-emission matrices and absorbance spectra |
feemscale |
Rescale FEEM spectra to a given norm and remember the scale factor |
feemscale.feem |
Rescale FEEM spectra to a given norm and remember the scale factor |
feemscale.feemcube |
Rescale FEEM spectra to a given norm and remember the scale factor |
feemscale.list |
Rescale FEEM spectra to a given norm and remember the scale factor |
feemscatter |
Handle scattering signal in FEEMs |
feemscatter.feem |
Handle scattering signal in FEEMs |
feemscatter.feemcube |
Handle scattering signal in FEEMs |
feemscatter.list |
Handle scattering signal in FEEMs |
feemsplithalf |
Split-half analysis of PARAFAC models |
fitted.feemflame |
Fluorescence and scAttering Model Estimation |
fitted.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
marine.colours |
Perceptually uniform palettes |
plot.feem |
Plot a FEEM object |
plot.feem.resid |
Plot a FEEM object |
plot.feemcube |
Plot a FEEM object |
plot.feemflame |
Fluorescence and scAttering Model Estimation |
plot.feemjackknife |
Jack-knife outlier detection in PARAFAC models |
plot.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
plot.feemsplithalf |
Split-half analysis of PARAFAC models |
print.feemcorcondia |
Core consistency diagnostic for PARAFAC models |
print.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
print.feemsplithalf |
Split-half analysis of PARAFAC models |
reorder.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
rescale |
Compute PARAFAC on a FEEM cube object and access the results |
rescale.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
residuals.feemflame |
Fluorescence and scAttering Model Estimation |
residuals.feemparafac |
Compute PARAFAC on a FEEM cube object and access the results |
t.feem |
Create a fluorescence excitation-emission matrix object |
write.openfluor |
Export a PARAFAC model for the OpenFluor database |
[.feem |
Extract or replace parts of FEEM objects |
[.feemcube |
Extract or replace parts of FEEM cubes |
[<-.feem |
Extract or replace parts of FEEM objects |
[<-.feemcube |
Extract or replace parts of FEEM cubes |