selPopSize {adegenet} | R Documentation |
Select genotypes of well-represented populations
Description
The function selPopSize
checks the sample size of each population in
a genind object and keeps only genotypes of populations
having a given minimum size.
Usage
## S4 method for signature 'genind'
selPopSize(x,pop=NULL,nMin=10)
Arguments
x |
a genind object |
pop |
a vector of characters or a factor giving the population of each genotype in 'x'. If not provided, seeked from x$pop. |
nMin |
the minimum sample size for a population to be
retained. Samples sizes strictly less than |
Value
A genind object.
Author(s)
Thibaut Jombart t.jombart@imperial.ac.uk
See Also
Examples
## Not run:
data(microbov)
table(pop(microbov))
obj <- selPopSize(microbov, n=50)
obj
table(pop(obj))
## End(Not run)
[Package adegenet version 2.1.10 Index]