multiplot {activityGCMM}R Documentation

Plot multiple GCMM activity curves

Description

Plot of multiple GCMM activity curves

Usage

multiplot(
  models,
  ymax = "NULL",
  scale = "2pi",
  lwd = 3,
  type = c("mixture", "components"),
  lty = c(1, 2, 3, 4, 5),
  col = c("grey15", "grey40", "grey55", "grey70"),
  axisunits = c("radians", "sun", "solar", "time", "none"),
  xlines = TRUE
)

Arguments

models

List of one or more objects of class GCMM containing output from the GCMM function

ymax

Value for upper limit of y-axis

scale

Scale for the plot, either "pi" (-pi, pi) or "2pi" (0, 2pi); default is that recommended by the GCMM function

lwd

Value for the width of the lines for the activity curves

type

Type of activity plots, either "mixture" for mixture plots (default) or "components" for components plots

lty

Vector of line types to use for the activity curves

col

Vector of colours to use for the activity curve lines in the plot

axisunits

Scale to use for the xaxis, either "radians", "time", "solar", "sun", or "none"; default="radians"

xlines

Whether to include lines on the graph for the x axis labels; default=TRUE

Value

Prints plot

Examples

 FoxActivityGCMM<-GCMM(data=redfoxsample$Radians, 
              RE1=redfoxsample$SamplingPeriod, family="vonmises", autorun=FALSE,
              adapt=0, sample=300, burnin=300, thin=1, n.chains=2)
           HumanActivityGCMM<-GCMM(data=humanssample$Radians, RE1=humanssample$SamplingPeriod, 
             family="vonmises", autorun=FALSE, adapt=0, sample=300, burnin=300, thin=1, n.chains=2)
           multiplot(models=list(FoxActivityGCMM,HumanActivityGCMM)) 


[Package activityGCMM version 1.1.1 Index]