Annotated Copy-Number Regions


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Documentation for package ‘acnr’ version 1.0.0

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acnr-package Annotated Copy-Number Regions
acnr Annotated Copy-Number Regions
getMinorMajorCopyNumbers Get minor and major copy number labels from region annotation labels
GSE11976_CRL2324 Annotated copy-number regions from the GEO GSE11976 data set.
GSE13372_HCC1143 Annotated copy-number regions from the GEO GSE13372 data set.
GSE29172_H1395 Annotated copy-number regions from the GEO GSE29172 (and GSE26302) data sets.
listDataSets List available data sets
listTumorFractions List of available tumor fractions for a data set
loadCnRegionData loadCnRegionData