match_to_tree {abdiv} | R Documentation |
Match vector of counts to phylogenetic tree
match_to_tree(x, tree, x_labels = NULL)
x |
A vector of species counts. |
tree |
A phylogenetic tree of class |
x_labels |
A vector of species labels for |
This function applies a couple of different methods to arrange the
data in x
to match a phylogenetic tree.
If x_labels
is provided, we use this vector to match the
elements of x
with the tip labels in the tree.
If x_labels
is not provided and x
is a named vector,
we use the names to match the tip labels in the tree.
If x_labels
is not provided and x
is not named, we
assume that x
is already in the correct order, check that the
length of x
matches the number of tips in the tree, and return
x
.
The vector x
, re-arranged to match the tree.