match_to_tree {abdiv} | R Documentation |
Match vector of counts to phylogenetic tree
Description
Match vector of counts to phylogenetic tree
Usage
match_to_tree(x, tree, x_labels = NULL)
Arguments
x |
A vector of species counts. |
tree |
A phylogenetic tree of class |
x_labels |
A vector of species labels for |
Details
This function applies a couple of different methods to arrange the
data in x
to match a phylogenetic tree.
If
x_labels
is provided, we use this vector to match the elements ofx
with the tip labels in the tree.If
x_labels
is not provided andx
is a named vector, we use the names to match the tip labels in the tree.If
x_labels
is not provided andx
is not named, we assume thatx
is already in the correct order, check that the length ofx
matches the number of tips in the tree, and returnx
.
Value
The vector x
, re-arranged to match the tree.
[Package abdiv version 0.2.0 Index]