fixDataStructure {WGCNA} | R Documentation |
Put single-set data into a form useful for multiset calculations.
Description
Encapsulates single-set data in a wrapper that makes the data suitable for functions working on multiset data collections.
Usage
fixDataStructure(data, verbose = 0, indent = 0)
Arguments
data |
A dataframe, matrix or array with two dimensions to be encapsulated. |
verbose |
Controls verbosity. 0 is silent. |
indent |
Controls indentation of printed progress messages. 0 means no indentation, every unit adds two spaces. |
Details
For multiset calculations, many quantities (such as expression data, traits, module eigengenes etc) are
presented by a common structure, a vector of lists (one list for each set) where each list has a
component data
that contains the actual (expression, trait, eigengene) data for the corresponding
set in the form of a dataframe. This funtion creates a vector of lists of length 1 and fills the
component data
with the content of parameter data
.
Value
As described above, input data in a format suitable for functions operating on multiset data collections.
Author(s)
Peter Langfelder, Peter.Langfelder@gmail.com
See Also
Examples
singleSetData = matrix(rnorm(100), 10,10);
encapsData = fixDataStructure(singleSetData);
length(encapsData)
names(encapsData[[1]])
dim(encapsData[[1]]$data)
all.equal(encapsData[[1]]$data, singleSetData);