run_galaxy_function {W4MRUtils}

run_galaxy_function - automate running functions in galaxy

Description

This function executes the provided function as a galaxy processing This provided function is expected to take two parameters:

• args, a list of command line parameters

• logger, the logger created for the tool

Usage

run_galaxy_function(tool_name, func, ...)

Arguments

tool_name

• The name of the tool

func

• The function to be run, after galaxy header is displayed

...

• Parameters propagated to run_galaxy_processing

Author(s)

L.Pavot

See Also

run_galaxy_processing