aa.count.function {VLF} | R Documentation |
Amino Acid Count
Description
Counts the number of each amino acid in each positino of the barcode.
Usage
aa.count.function(aminoAcids, seqlength)
Arguments
aminoAcids |
A matrix of barcode amino acid sequences. |
seqlength |
Length of the amino acid sequences. |
Details
The first and second column of the aminoAcid argument must contain the unique specimen identifier and the species name, respectively, followed by the amino acid sequence.
Value
A matrix containing the number of each amino acid in each position of the sequence. Each row is a different amino acid count, while the columns represent the sequence position.
Author(s)
Taryn B. T. Athey and Paul D. McNicholas
Examples
## Not run: data(birds_aminoAcids)
birds_aminoAcid_count <- aa.count.function(birds_aminoAcids, 216)
## End(Not run)
[Package VLF version 1.1 Index]