Visualising Splicing at Single-Cell Resolution
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Documentation for package ‘VALERIE’ version 1.1.0
Help Pages
| ComputePSI | Percent spliced-in (PSI) computation |
| PlotPSI | Percent spliced-in (PSI) visualization for alternative splicing events |
| PlotPSI.A3SS.MultiGroups | Percent spliced in (PSI) visualization for alternative 3' splice sites (A3SS) |
| PlotPSI.A3SS.TwoGroups | Percent spliced in (PSI) visualization for alternative 3' splice sites (A3SS) |
| PlotPSI.A5SS.MultiGroups | Percent spliced-in (PSI) visualization for alternative 5' splice sites (A5SS) |
| PlotPSI.A5SS.TwoGroups | Percent spliced-in (PSI) visualization for alternative 5' splice sites (A5SS) |
| PlotPSI.MXE.MultiGroups | Percent spliced-in (PSI) visualization for mutually exclusive exons (MXE) |
| PlotPSI.MXE.TwoGroups | Percent spliced-in (PSI) visualization for mutually exclusive exons (MXE) |
| PlotPSI.RI.MultiGroups | Percent spliced-in (PSI) visualization for retained introns (RI) |
| PlotPSI.RI.TwoGroups | Percent spliced-in (PSI) visualization for retained introns (RI) |
| PlotPSI.SE.MultiGroups | Percent spliced-in (PSI) visualization for skipped exons (SE) |
| PlotPSI.SE.TwoGroups | Percent spliced-in (PSI) visualization for skipped exons (SE) |