analyze_gene_drug_response_asso {UCSCXenaShiny}R Documentation

Analyze Association between Gene (Signature) and Drug Response with CCLE Data

Description

Analyze partial correlation of gene-drug association after controlling for tissue average expression.

Usage

analyze_gene_drug_response_asso(gene_list, combine = FALSE)

Arguments

gene_list

a gene symbol list.

combine

if TRUE, combine the expression of gene list as a gene signature.

Value

a data.frame

Examples

## Not run: 
analyze_gene_drug_response_asso("TP53")
analyze_gene_drug_response_asso(c("TP53", "KRAS"))
analyze_gene_drug_response_asso(c("TP53", "KRAS"), combine = TRUE)

# Visualization
vis_gene_drug_response_asso("TP53")

## End(Not run)

[Package UCSCXenaShiny version 2.1.0 Index]