Hierarchical Multinomial Processing Tree Modeling

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Documentation for package ‘TreeBUGS’ version 1.5.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

TreeBUGS-package	TreeBUGS: Hierarchical Multinomial Processing Tree Modeling
-.waic	WAIC: Widely Applicable Information Criterion
arnold2013	Data of a Source-Monitoring Experiment
BayesFactorMPT	Bayes Factors for Simple (Nonhierarchical) MPT Models
BayesFactorSlope	Bayes Factor for Slope Parameters in Latent-Trait MPT
betaMPT	Fit a Hierarchical Beta-MPT Model
betaMPTcpp	C++ Sampler for Hierarchical Beta-MPT Model
betweenSubjectMPT	Between-Subject Comparison of Parameters
correlationPosterior	Posterior Distribution for Correlations
extendMPT	Extend MCMC Sampling for MPT Model
genBetaMPT	Generate Data for Beta MPT Models
genMPT	Generate MPT Frequencies
genTraitMPT	Generate Data for Latent-Trait MPT Models
getGroupMeans	Get Mean Parameters per Group
getParam	Get Parameter Posterior Statistics
getSamples	Get Posterior Samples from Fitted MPT Model
marginalMPT	Marginal Likelihood for Simple MPT
plot.betaMPT	Plot Convergence for Hierarchical MPT Models
plot.simpleMPT	Plot Convergence for Hierarchical MPT Models
plot.traitMPT	Plot Convergence for Hierarchical MPT Models
plotDistribution	Plot Distribution of Individual Estimates
plotFit	Plot Posterior Predictive Mean Frequencies
plotFreq	Plot Raw Frequencies
plotParam	Plot Parameter Estimates
plotPrior	Plot Prior Distributions
plotPriorPost	Plot Prior vs. Posterior Distribution
posteriorPredictive	Get Posterior Predictive Samples
PPP	Compute Posterior Predictive P-Values
print.waic	WAIC: Widely Applicable Information Criterion
print.waic_difference	WAIC: Widely Applicable Information Criterion
priorPredictive	Prior Predictive Samples
probitInverse	Probit-Inverse of Group-Level Normal Distribution
readEQN	Read multiTree files
simpleMPT	C++ Sampler for Standard (Nonhierarchical) MPT Models
summarizeMCMC	MCMC Summary
summarizeMPT	Summarize JAGS Output for Hierarchical MPT Models
testHetChi	Chi-Square Test of Heterogeneity
testHetPerm	Permutation Test of Heterogeneity
traitMPT	Fit a Hierarchical Latent-Trait MPT Model
transformedParameters	Get Transformed Parameters
TreeBUGS	TreeBUGS: Hierarchical Multinomial Processing Tree Modeling
WAIC	WAIC: Widely Applicable Information Criterion
withinSubjectEQN	Generate EQN Files for Within-Subject Designs