Using Tip Dates with Phylogenetic Trees in BEAST


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Documentation for package ‘TipDatingBeast’ version 1.1-0

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TipDatingBeast-package Tip dating of phylogenetic trees with BEAST
LISTTAXA List taxa names present in the BEAST input file
ListTaxa List taxa names present in the BEAST input file
PLOTDRT List taxa names present in the BEAST input file
PlotDRT List taxa names present in the BEAST input file
PLOTLOOCV List taxa names present in the BEAST input file
PlotLOOCV List taxa names present in the BEAST input file
RANDOMCLUSTER randomize dates among tips in the BEAST input file
RandomCluster randomize dates among tips in the BEAST input file
RANDOMDATES randomize dates among tips in the BEAST input file
RandomDates randomize dates among tips in the BEAST input file
TAXAOUT generates input files for leave-one-out analyses in BEAST
TaxaOut generates input files for leave-one-out analyses in BEAST
TAXONOUT single Taxon out input file for leave-one-out analysis in BEAST
TaxonOut single Taxon out input file for leave-one-out analysis in BEAST
TipDatingBeast Tip dating of phylogenetic trees with BEAST