plotTable1Heatmap {Table1Heatmap} | R Documentation |
plotTable1Heatmap
Description
Plot a heatmap of table 1, either by plotting p values, n of patients colored by p-values or n of patients colored by percentage of total patients
Usage
plotTable1Heatmap(factorList, method = c("AssociationByP", "CrosstableByP",
"CrosstableByN")[1], drawRaster = NULL, ...)
Arguments
factorList |
named list with clinical variables coded as factors |
method |
'AssociationByP' : draw a heatmap with p-values of the association between parameters and a direction of effect if a Fisher Exact test was performed. 'CrosstableByP' : draw a heatmap with p-values of the association between parameters and show the crosstables 'CrosstableByN' : draw a heatmap with percentage of patients in the cell of a crosstable and show the crosstables |
drawRaster |
draw horizontal and vertical lines marking characteristics |
... |
plotting parameters for image |
Examples
lst <- list(a=sample(c(TRUE,FALSE), 10, replace=TRUE), b=sample(c(TRUE,FALSE), 10, replace=TRUE),
c=sample(c(TRUE,FALSE), 10, replace=TRUE))
lst <- lapply(lst, as.factor)
dev.new(height=10, width=10)
plotTable1Heatmap(factorList=lst, method='AssociationByP', drawRaster=TRUE)
plotTable1Heatmap(factorList=lst, method='CrosstableByP', drawRaster=TRUE)
plotTable1Heatmap(factorList=lst, method='CrosstableByN', drawRaster=TRUE)
[Package Table1Heatmap version 1.2 Index]