Tropical.HC.AGNES {TML}

Agglomerative (AGNES) tropical hierarchical clustering

Description

This function performs agglomerative (AGNES) hierarchical clustering over the space of ultrametrics defining the space of equidistant trees

Usage

Tropical.HC.AGNES(D, method = "average")

Arguments

D

matrix of points defining a tropical polytope. Rows are the tropical points

method

linkage method: "average", "min", or "max"

Value

list of distances in when merges occur; list of indices of points in each cluster

Author(s)

David Barnhill [e-mail]

References

David Barnhill, Ruriko Yoshida (2023). Clustering Methods Over the Tropically Convex Sets.

Examples

P <-Sim_points
Tropical.HC.AGNES(P, method="average")