TGS-package {TGS}

TGS: A package for Rapid Reconstruction of Time-Varying Gene Regulatory Networks

Description

The TGS package provides an implementation of the TGS algorithm and its variants. This algorithm reconstructs time-varying gene regulatory networks from time-series gene expression datasets. For algorithmic details, please see: Saptarshi Pyne, Alok Ranjan Kumar, and Ashish Anand. Rapid reconstruction of time-varying gene regulatory networks. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 17(1):278–291, Jan–Feb 2020.

The LearnTgs function

Please call TGS::LearnTgs() to invoke the TGS algorithm. See the manual for the required parameters.