| GWAS {SuperExactTest} | R Documentation |
GAWS Catalog Dataset
Description
This example dataset contains a list of gene sets associated with six types of clinical traits curated in the GWAS Catalog.
Usage
data(GWAS)Details
The six clinical traits are:
NEU (Bipolar disorder and schizophrenia, Schizophrenia, Major depressive disorder, Alzheimer's disease, Parkinson's disease, Cognitive performance, Bipolar disorder);
INF (Crohn's disease, Ulcerative colitis, Inflammatory bowel disease, Rheumatoid arthritis, Multiple sclerosis, Systemic lupus erythematosus);
CVD (Type 2 diabetes, Coronary heart disease, Blood pressure, total Cholesterol, HDL cholesterol, Triglycerides);
HT (height);
IgG (IgG glycosylation);
OB (obesity, obesity related traits).
References
Minghui Wang, Yongzhong Zhao, and Bin Zhang (2015). Efficient Test and Visualization of Multi-Set Intersections. Scientific Reports 5: 16923.