AccumulateNormal |
SubtypeDrug internal function |
CalculateSES |
SubtypeDrug internal function |
Colork |
Color |
Disease_drugs |
Simulated result data |
Drugs_CID |
Correspondence table of drug label and drug ID in PubCham database |
Geneexp |
Simulated gene expression data |
GeneexpT |
Gene expression data for testing |
getDrugMatrix |
SubtypeDrug internal function |
getDrugSpw |
SubtypeDrug internal function |
getDrugStructure |
Get drug chemical structure diagram data |
isPackageLoaded |
SubtypeDrug internal function |
plotDScoreHeatmap |
Plot a heat map of the normalized drug-disease reverse association scores for cancer samples |
plotDSpwHeatmap |
Plot heat map of the drug regulated subpathway activity score |
plotGlobalGraph |
Plot a global graph of the drug |
plotSpwNetGraph |
Polt a subpathway network graph |
PrioSubtypeDrug |
Prioritization of candidate cancer subtype-specific drugs (PrioSubtypeDrug) |
ReadClsFile |
SubtypeDrug internal function |
SpwNetworkData |
Subpathway network structure data |
Subtype_drugs |
Simulation result data |
UserDS |
Simulated user-defined drug regulator subpathway dataset |
UserDST |
User-defined drug regulator subpathway dataset for testing |
UserGS |
Simulated user-defined gene set data |
UserGST |
User-defined gene set data for testing |