Read and Modify 'STICS' Input/Output Files


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Documentation for package ‘SticsRFiles’ version 1.4.0

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compute_date_from_day Convert day number into date
compute_day_from_date Convert date into day number
convert_xml2txt Transforming a STICS xml file into a text file
download_data Download example USMs
download_usm_csv Downloading a CSV usms data file example into a directory
download_usm_xl Downloading an Excel usms data file example into a directory
force_param_values Generates files to force parameters values in STICS simulations
gen_ini_xml Generate STICS ini xml file(s) from a template or an input file
gen_obs Generating observation data files from a data.frame
gen_sols_xml Generate STICS sols xml file from a template or an input file
gen_sta_xml Generate STICS sta xml file(s) from a template or an input file
gen_tec_xml Generate STICS tec xml file(s) from a template or an input file
gen_usms_xml Generate STICS usms xml file from a template or an input file
gen_usms_xml2txt Generating one or several usms directories from a javastics workspace content
gen_varmod Generating a var.mod type file
get_climate_txt Read STICS input meteorology file
get_cultivars_list Get the cultivar names for an xml plant file (*_plt.xml)
get_cultivars_param Get the values of cultivar-specific parameters from an xml plant file (*_plt.xml)
get_examples_path Getting examples files path attached to a STICS version for a given file type
get_general_txt Read STICS input parameters from text files
get_ini_txt Read STICS input parameters from text files
get_lai_forcing Getting LAI forcing for each usm
get_obs Read STICS observation files (*.obs)
get_param_info Finding parameters information using partial search words
get_param_txt Read STICS input parameters from text files
get_param_xml Getting parameter values from xml files
get_plants_nb Getting plants number per usm for all usms or selected from a usm name vector
get_plant_txt Read STICS input parameters from text files
get_report_results Extracting data from the STICS report file
get_sim Load and format STICS daily output file(s)
get_soils_list Get the soil names for an usms.xml file
get_soil_txt Read STICS input parameters from text files
get_station_txt Read STICS input parameters from text files
get_stics_versions_compat Get the compatible STICS versions
get_tec_txt Read STICS input parameters from text files
get_tmp_txt Read STICS input parameters from text files
get_usms_files Getting existing xml files path list per usm from an usms.xml file
get_usms_list Getting usms names list for an usms.xml file
get_usm_txt Read STICS input parameters from text files
get_varmod Get desired STICS outputs
get_var_info Find STICS output variable names and description
is_mac Evaluating if the OS is a Mac OS type
is_stics_param Search if a STICS parameter exist
is_stics_var Search if a STICS variable exist
is_unix Evaluating if the OS is a unix like type
is_windows Evaluating if the OS is a windows type
read_params_table Getting parameters data from tables files (Excel sheet, csv)
set_general_txt Set (replace) STICS input file parameters
set_ini_txt Set (replace) STICS input file parameters
set_param_txt Set (replace) STICS input file parameters
set_param_xml Setting parameter values into xml files
set_plant_txt Set (replace) STICS input file parameters
set_soil_txt Set (replace) STICS input file parameters
set_station_txt Set (replace) STICS input file parameters
set_tec_txt Set (replace) STICS input file parameters
set_tmp_txt Set (replace) STICS input file parameters
set_usm_txt Set (replace) STICS input file parameters
upgrade_ini_xml Upgrading _ini.xml file(s) to a newer version
upgrade_param_gen_xml Upgrading a param_gen.xml file to a newer version
upgrade_param_newform_xml Upgrading a param_newform.xml file to a newer version
upgrade_plt_xml Upgrading _plt.xml file(s) to a newer version
upgrade_sols_xml Upgrading a sols.xml file to a newer version
upgrade_sta_xml Upgrading _sta.xml file(s) to a newer version
upgrade_tec_xml Upgrading _tec.xml file(s) to a newer version
upgrade_usms_xml Upgrading a usms.xml file to a newer version
upgrade_workspace_xml Upgrading XML files of a JavaSTICS workspace directory to a newer STICS version format
[.cropr_simulation '[' method for 'cropr_simulation'