setClusters {SoupX} | R Documentation |
Sets clustering for SoupChannel
Description
Adds or updates clustering information to meta-data table in SoupChannel object.
Usage
setClusters(sc, clusters)
Arguments
sc |
A SoupChannel object. |
clusters |
A named vector, where entries are the cluster IDs and names are cellIDs. If no names are provided, the order is assumed to match the order in |
Value
An updated SoupChannel object with clustering information stored.
Examples
sc = load10X(system.file('extdata','toyData',package='SoupX'))
mDat = read.table(system.file('extdata','toyData','metaData.tsv',package='SoupX'),sep='\t')
sc = setClusters(sc,mDat$res.1)
[Package SoupX version 1.6.2 Index]