scToy {SoupX}R Documentation

Toy SoupChanel object

Description

A SoupChannel object created from the toy data used in examples.

Usage

data(scToy)

Format

scToy is a SoupChannel object.

Details

The toy data is created from a modified version of the extremely reduced Seurat pbmc_small dataset. It includes clusters, tSNE coordinates and a flat estimate of 0.1 contamination. It includes data for only 226 genes and 62 cells and should not be used for anything other than testing functions as it is not representative of real data in any way.


[Package SoupX version 1.6.2 Index]