plot_term_marginals {SimReg}

Create ontological plot of marginal probabilities of terms

Description

Create ontological plot of marginal probabilities of terms

Usage

plot_term_marginals(
  ontology,
  term_marginals,
  max_terms = 10,
  min_probability = 0.01,
  ...
)

Arguments

ontology

ontology_index object.

term_marginals

Numeric vector of marginal probabilities of inclusion in phi for individual terms, named by the term IDs.

max_terms

Maximum number of terms to include in plot. Note that additional terms may be included when terms have the same marginal probability, and common ancestor terms are included.

min_probability

Threshold probability of inclusion in phi for triggering inclusion in plot.

...

Additional arguments to pass to onto_plot