SelectIntegrationFeatures5 {Seurat}

Select integration features

Description

Select integration features

Usage

SelectIntegrationFeatures5(
  object,
  nfeatures = 2000,
  assay = NULL,
  method = NULL,
  layers = NULL,
  verbose = TRUE,
  ...
)

Arguments

object

Seurat object

nfeatures

Number of features to return for integration

assay

Name of assay to use for integration feature selection

method

Which method to pull. For HVFInfo and VariableFeatures, choose one from one of the following:

• “vst”

• “sctransform” or “sct”

• “mean.var.plot”, “dispersion”, “mvp”, or “disp”

layers

Name of layers to use for integration feature selection

verbose

Print messages

...

Arguments passed on to method