IFeaturePlot {Seurat}

Visualize features in dimensional reduction space interactively

Description

Visualize features in dimensional reduction space interactively

Usage

IFeaturePlot(object, feature, dims = c(1, 2), reduction = NULL, slot = "data")

Arguments

object

Seurat object

feature

Feature to plot

dims

Dimensions to plot, must be a two-length numeric vector specifying x- and y-dimensions

reduction

Which dimensionality reduction to use. If not specified, first searches for umap, then tsne, then pca

slot

Which slot to pull expression data from?

Value

Returns the final plot as a ggplot object