aggremetab |
Aggregate metabolism data |
aggremetab.swmpr |
Aggregate metabolism data |
aggreswmp |
Aggregate swmpr data |
aggreswmp.swmpr |
Aggregate swmpr data |
all_params |
Import current station records from the CDMO |
all_params_dtrng |
Get CDMO records within a date range |
apacpnut |
Example nutrient data for Apalachicola Bay Cat Point station. |
apacpwq |
Example water quality data for Apalachicola Bay Cat Point station. |
apadbwq |
Example water quality data for Apalachicola Bay Dry Bar station. |
apaebmet |
Example weather data for Apalachicola Bay East Bay station. |
calckl |
Calculate oxygen mass transfer coefficient |
cens_id |
Flag observations above/below detection limits |
cens_id.swmpr |
Flag observations above/below detection limits |
comb |
Combine swmpr data |
comb.default |
Combine swmpr data |
comb.swmpr |
Combine swmpr data |
decomp |
Simple trend decomposition |
decomp.default |
Simple trend decomposition |
decomp.swmpr |
Simple trend decomposition |
decompTs |
Decompose a time series |
decomp_cj |
Simple trend decomposition of monthly swmpr data |
decomp_cj.default |
Simple trend decomposition of monthly swmpr data |
decomp_cj.swmpr |
Simple trend decomposition of monthly swmpr data |
ecometab |
Ecosystem metabolism |
ecometab.default |
Ecosystem metabolism |
ecometab.swmpr |
Ecosystem metabolism |
gradcols |
Get colors for plots |
hist.swmpr |
Plot swmpr using a histogram |
import_local |
Import local CDMO data |
lines.swmpr |
Plot swmpr data |
map_reserve |
Map a reserve |
metab_day |
Identify metabolic days in a time series |
metab_day.default |
Identify metabolic days in a time series |
na.approx.swmpr |
Linearly interpolate gaps |
overplot |
Plot multiple SWMP time series on the same y-axis |
overplot.default |
Plot multiple SWMP time series on the same y-axis |
overplot.swmpr |
Plot multiple SWMP time series on the same y-axis |
oxySol |
Dissolved oxygen at saturation |
param_names |
Get parameters of a given type |
parser |
Parse web results for swmpr |
plot.swmpr |
Plot swmpr data |
plot_metab |
Plot ecosystem metabolism for a swmpr object |
plot_metab.swmpr |
Plot ecosystem metabolism for a swmpr object |
plot_quants |
Create a plot of data for a single year overlaid on historical data. |
plot_quants.swmpr |
Create a plot of data for a single year overlaid on historical data. |
plot_summary |
Plot graphical summaries of SWMP data |
plot_summary.swmpr |
Plot graphical summaries of SWMP data |
plot_wind |
Create a wind rose |
plot_wind.swmpr |
Create a wind rose |
qaqc |
QAQC filtering for SWMP data |
qaqc.swmpr |
QAQC filtering for SWMP data |
qaqcchk |
Summary of QAQC flags in SWMP data |
qaqcchk.swmpr |
Summary of QAQC flags in SWMP data |
rem_reps |
Remove replicates in nutrient data |
rem_reps.swmpr |
Remove replicates in nutrient data |
setstep |
Format a swmpr time vector |
setstep.default |
Format a swmpr time vector |
setstep.swmpr |
Format a swmpr time vector |
single_param |
Get CDMO records for a single parameter |
site_codes |
Obtain metadata for all stations |
site_codes_ind |
Obtain metadata for a single reserve |
smoother |
Smooth swmpr data |
smoother.default |
Smooth swmpr data |
smoother.swmpr |
Smooth swmpr data |
stat_locs |
Locations of NERRS sites |
subset.swmpr |
Subset a swmpr object |
swmpr |
Create a swmpr object |
time_vec |
Format SWMP datetimestamp |