bladderMALDIRompp2010 {SPUTNIK} | R Documentation |
Load the example MALDI-MSI data.
Description
Loads a single mouse urinary bladder MALDI mass spectrometry imaging dataset
acquired in positive ionization mode using Thermo qExactive Orbitrap. The
dataset is available at
"https://raw.github.com/paoloinglese/SPUTNIKexamples/master/data/bladder_maldi_prepr_MALDIquant.RData"
The dataset is loaded in the R environment under the variable name maldiData
.
Usage
bladderMALDIRompp2010(verbose = TRUE)
Arguments
verbose |
Logical (default = TRUE). Show additional output text. |
Value
desiData MS intensity matrix. Rows represent pixels, columns represent matched peaks.
References
Rompp, A., Guenther, S., Schober, Y., Schulz, O., Takats, Z., Kummer, W., & Spengler, B. (2010). Histology by mass spectrometry: label-free tissue characterization obtained from high-accuracy bioanalytical imaging. Angewandte chemie international edition, 49(22), 3834-3838.