TSC {SIGN}R Documentation

TSC is a function to calculate transcriprtional similarity coefficient between two biological pathways

Description

TSC is a function to calculate transcriprtional similarity coefficient between two biological pathways

Usage

TSC(PathwayExp1, PathwayExp2)

Arguments

PathwayExp1

Expression matrix of genes within the chosen pathway in the 1st set of samples

PathwayExp2

Expression matrix of genes within the chosen pathway in the 2nd set of samples

Value

Transcriptional similarity coefficient

Examples

Pathway1_ExpMat <- matrix(runif(100,0,10), ncol = 10)
Pathway2_ExpMat <- matrix(runif(100,0,10), ncol = 10)
TSC(Pathway1_ExpMat, Pathway2_ExpMat)

[Package SIGN version 0.1.0 Index]