dataXY_df |
Terra satellite data (X,Y) for running the xgboost model . |
label.feature |
Modify labels for features under plotting |
labels_within_package |
labels_within_package: Some labels package auther defined to make his plot, mainly serve the paper publication. |
new_labels |
new_labels: a place holder default to NULL. |
plot.label |
Internal-function to revise axis label for each feature |
scatter.plot.diagonal |
Make customized scatter plot with diagonal line and R2 printed. |
scatter.plot.simple |
Simple scatter plot, adding marginal histogram by default. |
shap.importance |
Variable importance as measured by mean absolute SHAP value. |
shap.plot.dependence |
SHAP dependence plot and interaction plot, optional to be colored by a selected feature |
shap.plot.force_plot |
Make the SHAP force plot |
shap.plot.force_plot_bygroup |
Make the stack plot, optional to zoom in at certain x or certain cluster |
shap.plot.summary |
SHAP summary plot core function using the long format SHAP values |
shap.plot.summary.wrap1 |
A wrapped function to make summary plot from model object and predictors |
shap.plot.summary.wrap2 |
A wrapped function to make summary plot from given SHAP values matrix |
shap.prep |
Prepare SHAP values into long format for plotting |
shap.prep.interaction |
Prepare the interaction SHAP values from predict.xgb.Booster |
shap.prep.stack.data |
Prepare data for SHAP force plot (stack plot) |
shap.values |
Get SHAP scores from a trained XGBoost or LightGBM model |
shap_int_iris |
The interaction effect SHAP values example using iris dataset. |
shap_long_iris |
The long-format SHAP values example using iris dataset. |
shap_score |
SHAP values example from dataXY_df . |
shap_values_iris |
SHAP values example using iris dataset. |