SCORPIUS-package |
SCORPIUS: Trajectory inference from single-cell RNA sequencing data. |
draw_trajectory_heatmap |
Draw time-series heatmap |
draw_trajectory_plot |
Visualise SCORPIUS |
extract_modules |
Extract modules of features |
generate_dataset |
Generate a synthetic dataset |
gene_importances |
Calculate the importance of a feature |
ginhoux |
scRNA-seq data of dendritic cell progenitors. |
infer_initial_trajectory |
Infer an initial trajectory through space |
infer_trajectory |
Infer linear trajectory through space |
reduce_dimensionality |
Dimensionality reduction |
reverse_trajectory |
Reverse a trajectory |
SCORPIUS |
SCORPIUS: Trajectory inference from single-cell RNA sequencing data. |
ti_scorpius |
Infer a trajectory using SCORPIUS |