preprocess.signatures {SCINA}

A function to convert signatures uploaded via .csv files to lists used by SCINA.

Description

A function to convert signatures uploaded via .csv files to lists used by SCINA.

Usage

preprocess.signatures(file_path)

Arguments

file_path

The path of the .csv file. The first row of the file should be cell type names. Each column is occupied by the signature genes/protein markers for the cell type in the first row. Please find more details in SCINA.

Value

A list of signature gene lists as an input for SCINA.