SADEG.StackingEnergy {SADEG}

SADEG.StackingEnergy

Description

Average free energy

Usage

SADEG.StackingEnergy(Nucleotide_Sequence)

Arguments

Nucleotide_Sequence

Nucleotide Sequence

Details

Average free energy value was obtained via multiplying average energy of each dimer from each sequence in number of stacked bases. In order to designate and identify a product-favored process, minus sign was denoted before the average free energy (AFE) value. Lastly, all relevant stacked bases in each gene cumulatively defined the total stacking energy for respective sequences.

Value

StackingEnergy

Author(s)

Babak Khorsand

Examples

SADEG.StackingEnergy("actagtcacgatcag")