inertia {Rpdb} | R Documentation |
Moment of Inertia of a Molecular System
Description
Computes the inertia tensor of a molecular system from atomic coordinates and masses.
Usage
inertia(...)
## S3 method for class 'coords'
inertia(x, m = NULL, ...)
## S3 method for class 'atoms'
inertia(x, m = NULL, ...)
## S3 method for class 'pdb'
inertia(x, m = NULL, ...)
Arguments
... |
further arguments passed to or from other methods. |
x |
an R object containing atomic coordinates. |
m |
a numeric vector containing atomic masses. |
Details
inertia
is a generic function to compute the inertia tensor of a
molecular system. For object of class ‘coords’ both atomic coordinates
and masses have to be speifyed. For object of class ‘atoms’ the masses
are determined from the elename
component of the object (see
toSymbols
and masses
). For object of class
‘pdb’ the atoms
component is used.
Value
Return the inertia tensor in a 3x3 matrix.
See Also
toSymbols
, masses
, viewInertia
Examples
C70 <- read.pdb(system.file("examples/C70.pdb", package="Rpdb"))
inertia(C70)
visualize(C70, mode = NULL)
viewXY()
viewInertia(C70)
[Package Rpdb version 2.3.4 Index]