save.coords {Racmacs}

Save acmap coordinate data to a file

Description

Saves acmap coordinate data of all or specified antigens and sera to a .csv file.

Usage

save.coords(
  map,
  filename,
  optimization_number = 1,
  antigens = TRUE,
  sera = TRUE
)

Arguments

map

The acmap data object.

filename

Path to the file.

optimization_number

Optimization number from which to take coordinates

antigens

Antigens to include, either as a numeric vector of indices or character vector of names.

sera

Sera to include, either as a numeric vector of indices or character vector of names.

Value

No return value, called for the side effect of saving the coordinate data.

See Also

Other functions for working with map data: acmap(), addOptimization(), agReactivityAdjustments(), as.json(), edit_agNames(), edit_srNames(), keepBestOptimization(), keepSingleOptimization(), layerNames(), orderPoints, read.acmap(), read.titerTable(), removePoints, save.acmap(), save.titerTable(), subsetCommonPoints, subsetMap()