| pointStress {Racmacs} | R Documentation |
Get individual point stress
Description
Functions to get stress associated with individual points in a map.
Usage
agStress(map, antigens = TRUE, optimization_number = 1)
srStress(map, sera = TRUE, optimization_number = 1)
srStressPerTiter(map, sera = TRUE, optimization_number = 1)
agStressPerTiter(map, antigens = TRUE, optimization_number = 1)
Arguments
map |
The acmap data object |
antigens |
Which antigens to check stress for, specified by index or name (defaults to all antigens). |
optimization_number |
The optimization number |
sera |
Which sera to check stress for, specified by index or name (defaults to all sera). |
Value
A numeric vector of point stresses
See Also
See mapStress() for getting the total map stress directly.
Other map diagnostic functions:
agCohesion(),
bootstrapBlobs(),
bootstrapMap(),
checkHemisphering(),
dimensionTestMap(),
logtiterTable(),
map-table-distances,
mapBootstrapCoords,
mapDistances(),
mapRelaxed(),
mapResiduals(),
ptBootstrapBlob,
ptBootstrapCoords(),
ptLeverage,
ptTriangulationBlob,
recalculateStress(),
stressTable(),
tableColbases(),
tableDistances(),
triangulationBlobs(),
unstableMaps
Other functions relating to map stress calculation:
logtiterTable(),
mapDistances(),
mapResiduals(),
recalculateStress(),
stressTable(),
tableColbases(),
tableDistances()