secondCutoffErr {RVA}

Second Cutoff Error

Description

The function takes in a list of dataframe, comp names and a specified type, to output a dataframe styled for ggplot.

Usage

secondCutoffErr(df, comp.names, TypeQ = 1)

Arguments

df

A list of dataframes.

comp.names

a character vector contain the comparison names corresponding to the same order to the dat.list. default = NULL.

TypeQ

If type = 1(default) return directional null plot. If type = 2 return non directional null plot.

Details

secondCutoffErr is a function specifically meant to be used for list inputs. It is used for cases where after applying filter to the data, one of the comparison ID gets left out, this adversely effects the ggplot

Value

Returns a dataframe.

References

Xingpeng Li & Siddhartha Pachhai RVA - RNAseq Visualization Automation tool.