'R' Bindings for 'TMB'
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Documentation for package ‘RTMB’ version 1.5
Help Pages
A B C D E F G I L M O P Q R S T U misc
| RTMB-package | RTMB: R bindings for 'TMB' |
-- A --
| ADapply | AD apply functions |
| ADcomplex | AD complex numbers |
| adcomplex | AD complex numbers |
| ADconstruct | AD aware numeric constructors |
| ADjoint | AD adjoint code from R |
| ADmatrix | AD matrix methods (sparse and dense) |
| ADoverload | Enable extra RTMB convenience methods |
| ADREPORT | Interface to TMB |
| ADvector | The AD vector and its methods |
| advector | The AD vector and its methods |
| aperm.advector | The AD vector and its methods |
| apply-method | AD apply functions |
| as.array.simref | Simulation |
| as.complex.advector | The AD vector and its methods |
| as.double.advector | The AD vector and its methods |
| as.vector.advector | The AD vector and its methods |
-- B --
| besselI-method | Distributions and special functions for which AD is implemented |
| besselJ-method | Distributions and special functions for which AD is implemented |
| besselK-method | Distributions and special functions for which AD is implemented |
| besselY-method | Distributions and special functions for which AD is implemented |
-- C --
| c.advector | The AD vector and its methods |
| cbind.advector | AD matrix methods (sparse and dense) |
| checkConsistency | Interface to TMB |
| colSums-method | AD matrix methods (sparse and dense) |
| Complex.advector | The AD vector and its methods |
| Conj.adcomplex | AD complex numbers |
| cov2cor-method | AD matrix methods (sparse and dense) |
| crossprod-method | AD matrix methods (sparse and dense) |
-- D --
| DataEval | The AD tape |
| dautoreg | Multivariate Gaussian densities |
| dbeta-method | Distributions and special functions for which AD is implemented |
| dbinom-method | Distributions and special functions for which AD is implemented |
| dbinom_robust | Distributions and special functions for which AD is implemented |
| dcompois | Distributions and special functions for which AD is implemented |
| dcompois2 | Distributions and special functions for which AD is implemented |
| dexp-method | Distributions and special functions for which AD is implemented |
| df-method | Distributions and special functions for which AD is implemented |
| dgamma-method | Distributions and special functions for which AD is implemented |
| dgmrf | Multivariate Gaussian densities |
| diag-method | AD aware numeric constructors |
| diag-method | AD matrix methods (sparse and dense) |
| diff.advector | The AD vector and its methods |
| diff.simref | Simulation |
| dim-method | AD matrix methods (sparse and dense) |
| dim.adcomplex | AD complex numbers |
| dim.osa | Recursive quantile residuals |
| dim.simref | Simulation |
| dim<-.adcomplex | AD complex numbers |
| dim<-.simref | Simulation |
| Distributions | Distributions and special functions for which AD is implemented |
| dlgamma | Distributions and special functions for which AD is implemented |
| dlnorm-method | Distributions and special functions for which AD is implemented |
| dlogis-method | Distributions and special functions for which AD is implemented |
| dmultinom-method | Distributions and special functions for which AD is implemented |
| dmvnorm | Multivariate Gaussian densities |
| dnbinom-method | Distributions and special functions for which AD is implemented |
| dnbinom2 | Distributions and special functions for which AD is implemented |
| dnbinom_robust | Distributions and special functions for which AD is implemented |
| dnorm-method | Distributions and special functions for which AD is implemented |
| dpois-method | Distributions and special functions for which AD is implemented |
| dseparable | Multivariate Gaussian densities |
| dSHASHo | Distributions and special functions for which AD is implemented |
| dsn | Distributions and special functions for which AD is implemented |
| dt-method | Distributions and special functions for which AD is implemented |
| dtweedie | Distributions and special functions for which AD is implemented |
| dweibull-method | Distributions and special functions for which AD is implemented |
-- E --
| exp.adcomplex | AD complex numbers |
| expAv | Matrix exponential of sparse matrix multiplied by a vector. |
| expm-method | AD matrix methods (sparse and dense) |
-- F --
| fft-method | AD complex numbers |
-- G --
| getAll | Interface to TMB |
| GetTape | The AD tape |
-- I --
| ifelse-method | The AD vector and its methods |
| Im.adcomplex | AD complex numbers |
| interpol1Dfun | Interpolation |
| interpol2Dfun | Interpolation |
| Interpolation | Interpolation |
| is.array.osa | Recursive quantile residuals |
| is.array.simref | Simulation |
| is.matrix.osa | Recursive quantile residuals |
| is.matrix.simref | Simulation |
| is.na.simref | Simulation |
| is.numeric.advector | The AD vector and its methods |
-- L --
| length.adcomplex | AD complex numbers |
| length.osa | Recursive quantile residuals |
| length.simref | Simulation |
-- M --
| MakeADFun | Interface to TMB |
| MakeTape | The AD tape |
| Math.advector | The AD vector and its methods |
| Math.simref | Simulation |
| matrix-method | AD aware numeric constructors |
| mean.advector | The AD vector and its methods |
| Mod.adcomplex | AD complex numbers |
| MVgauss | Multivariate Gaussian densities |
-- O --
| OBS | Interface to TMB |
| oneStepPredict | Recursive quantile residuals |
| Ops.advector | The AD vector and its methods |
| Ops.simref | Simulation |
| OSA-residuals | Recursive quantile residuals |
| outer-method | The AD vector and its methods |
-- P --
| pbeta-method | Distributions and special functions for which AD is implemented |
| pbinom-method | Distributions and special functions for which AD is implemented |
| pexp-method | Distributions and special functions for which AD is implemented |
| pgamma-method | Distributions and special functions for which AD is implemented |
| plogis-method | Distributions and special functions for which AD is implemented |
| pnorm-method | Distributions and special functions for which AD is implemented |
| ppois-method | Distributions and special functions for which AD is implemented |
| print.advector | The AD vector and its methods |
| print.Tape | The AD tape |
| prod.advector | The AD vector and its methods |
| pweibull-method | Distributions and special functions for which AD is implemented |
-- Q --
| qbeta-method | Distributions and special functions for which AD is implemented |
| qexp-method | Distributions and special functions for which AD is implemented |
| qgamma-method | Distributions and special functions for which AD is implemented |
| qlogis-method | Distributions and special functions for which AD is implemented |
| qnorm-method | Distributions and special functions for which AD is implemented |
| qweibull-method | Distributions and special functions for which AD is implemented |
-- R --
| rbind.advector | AD matrix methods (sparse and dense) |
| Re.adcomplex | AD complex numbers |
| rep.advector | The AD vector and its methods |
| REPORT | Interface to TMB |
| rowSums-method | AD matrix methods (sparse and dense) |
| RTMB | RTMB: R bindings for 'TMB' |
-- S --
| sapply-method | AD apply functions |
| sdreport | Interface to TMB |
| show-method | AD complex numbers |
| simref | Simulation |
| Simulation | Simulation |
| solve-method | AD matrix methods (sparse and dense) |
| splinefun-method | Interpolation |
| sqrt.adcomplex | AD complex numbers |
| sum.advector | The AD vector and its methods |
| Summary.advector | The AD vector and its methods |
| Summary.simref | Simulation |
-- T --
| t.adcomplex | AD complex numbers |
| t.adsparse | AD matrix methods (sparse and dense) |
| t.simref | Simulation |
| Tape | The AD tape |
| TapeConfig | The AD tape |
| tcrossprod-method | AD matrix methods (sparse and dense) |
| TMB-interface | Interface to TMB |
-- U --
| unstructured | Multivariate Gaussian densities |
-- misc --
| $.Tape | The AD tape |
| %*%-method | AD matrix methods (sparse and dense) |
| %~% | Distributional assignment operator |
| *.adcomplex | AD complex numbers |
| +.adcomplex | AD complex numbers |
| -.adcomplex | AD complex numbers |
| /.adcomplex | AD complex numbers |
| [.adcomplex | AD complex numbers |
| [.adsparse | AD matrix methods (sparse and dense) |
| [.advector | The AD vector and its methods |
| [.osa | Recursive quantile residuals |
| [.simref | Simulation |
| [<-.adcomplex | AD complex numbers |
| [<-.adsparse | AD matrix methods (sparse and dense) |
| [<-.advector | The AD vector and its methods |
| [<-.simref | Simulation |
| [[.advector | The AD vector and its methods |