stemCords {RRNA}

internal function that generates coordinates for a stem

Description

internal function that generates coordinates for an RNA secondary structure stem

Usage

stemCords(input, p1, p2, x1, y1, x2, y2, x3, y3)

Arguments

input

ct file as data frame

p1

index of nucleotide in first base pair of the stem

p2

index of nucleotide in first base pair of the stem

x1

x coordinate of p1

y1

y coordinate of p1

x2

x coordinate of p2

y2

y coordinate of p2

x3

direction vector x component

y3

direction vector y component

Value

set of points

Note

This is an internal function not recommend for use out side of the ct2coord function

Author(s)

JP Bida

See Also

ct2coord

Examples

### Internal Function ###