PhenotypicBM-class {RPANDA}

Class "PhenotypicBM"

Description

A subclass of the PhenotypicModel class, intended to represent the model of Brownian phenotypic evolution.

Objects from the Class

Objects can be created by calls of the form new("PhenotypicBM", ...).

Slots

matrixCoalescenceTimes:

Object of class "matrix" ~~

name:

Object of class "character" ~~

period:

Object of class "numeric" ~~

aAGamma:

Object of class "function" ~~

numbersCopy:

Object of class "numeric" ~~

numbersPaste:

Object of class "numeric" ~~

initialCondition:

Object of class "function" ~~

paramsNames:

Object of class "character" ~~

constraints:

Object of class "function" ~~

params0:

Object of class "numeric" ~~

tipLabels:

Object of class "character" ~~

tipLabelsSimu:

Object of class "character" ~~

comment:

Object of class "character" ~~

Extends

Class "PhenotypicModel", directly.

Methods

getTipDistribution

signature(object = "PhenotypicBM"): ...

Author(s)

Marc Manceau

References

Manceau M., Lambert A., Morlon H. (2017) A unifying comparative phylogenetic framework including traits coevolving across interacting lineages Systematic Biology, and the associated Supplementary material.

Examples

showClass("PhenotypicBM")