Image Registration Using the 'NiftyReg' Library


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Documentation for package ‘RNiftyReg’ version 2.8.3

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affine Create, test for and print affine matrices
applyTransform Apply a precomputed transformation
as.array.niftyreg Two and three dimensional image registration
asAffine Create, test for and print affine matrices
asAffine.affine Create, test for and print affine matrices
asAffine.default Create, test for and print affine matrices
asAffine.niftiImage Create, test for and print affine matrices
asAffine.niftyreg Create, test for and print affine matrices
asAffine.niftyregRDS Create, test for and print affine matrices
asNifti.niftyreg Two and three dimensional image registration
buildAffine Build an affine matrix up from its constituent transformations
composeTransforms Compose transformations
decomposeAffine Decompose an affine matrix into its constituent transformations
deformationField Calculate the deformation field for a transformation
forward Extract forward and reverse transformations
forward.niftyreg Extract forward and reverse transformations
halfTransform Calculate a half transformation
invertAffine Invert an affine matrix
isAffine Create, test for and print affine matrices
isImage Test whether an object represents an image
jacobian Extract a Jacobian determinant map
loadTransform Save and load transform objects
niftyreg Two and three dimensional image registration
niftyreg.linear Two and three dimensional linear image registration
niftyreg.nonlinear Two and three dimensional nonlinear image registration
print.affine Create, test for and print affine matrices
readAffine Read an affine matrix from a file
readNifti Read a NIfTI format file
rescale Apply simple transformations
reverse Extract forward and reverse transformations
reverse.niftyreg Extract forward and reverse transformations
rotate Apply simple transformations
saveTransform Save and load transform objects
similarity Similarity measures between images
skew Apply simple transformations
translate Apply simple transformations
writeAffine Write an affine matrix to a file