plot_library_complexity {RNAseqQC}

Plot the library complexity

Description

Plot per sample the fraction of genes, versus the fraction of total counts.

Usage

plot_library_complexity(dds, show_progress = TRUE)

Arguments

dds

A DESeqDataSet

show_progress

Whether to show a progress bar of the computation.

Value

A ggplot object of the ggplot2 package that contains the library complexity plot.

Examples

library("DESeq2")
set.seed(1)
dds <- makeExampleDESeqDataSet()
plot_library_complexity(dds)