mean_sd_plot {RNAseqQC}

Create a mean-sd plot Make a scatterplot that shows for each gene its standard deviation versus mean.

Description

Create a mean-sd plot Make a scatterplot that shows for each gene its standard deviation versus mean.

Usage

mean_sd_plot(vsd)

Arguments

vsd

A DESeqTransform object

Value

A ggplot object of the ggplot2 package that contains the mean-sd plot.

Examples

library("DESeq2")
dds <- makeExampleDESeqDataSet(interceptMean=10, n=5000)
vsd <- vst(dds)
mean_sd_plot(vsd)