LightResponseCurveFitter_computeCost {REddyProc}

LightResponseCurveFitter computeCost

Description

Computing residual sum of squares for predictions vs. data of NEE

Usage

LightResponseCurveFitter_computeCost(thetaOpt, 
    theta, iOpt, flux, sdFlux, parameterPrior, 
    sdParameterPrior, ...)

Arguments

thetaOpt

parameter vector with components of theta0 that are optimized

theta

parameter vector with positions as in argument of LightResponseCurveFitter_getParameterNames

iOpt

position in theta that are optimized

flux

numeric: NEP (-NEE) or GPP time series [umolCO2 / m2 / s], should not contain NA

sdFlux

numeric: standard deviation of Flux [umolCO2 / m2 / s], should not contain NA

parameterPrior

numeric vector along theta: prior estimate of parameter (range of values)

sdParameterPrior

standard deviation of parameterPrior

...

other arguments to LightResponseCurveFitter_predictLRC, such as VPD0, fixVPD

Author(s)

Department for Biogeochemical Integration at MPI-BGC, Jena, Germany <[e-mail]> [cph], Thomas Wutzler <[e-mail]> [aut, cre], Markus Reichstein <[e-mail]> [aut], Antje Maria Moffat <[e-mail]> [aut, trl], Olaf Menzer <[e-mail]> [ctb], Mirco Migliavacca <[e-mail]> [aut], Kerstin Sickel <[e-mail]> [ctb, trl], Ladislav <U+0160>igut <[e-mail]> [ctb]